Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Ezh2

Cell type

Cell type Class
Neural
Cell type
Brain
MeSH Description
The part of CENTRAL NERVOUS SYSTEM that is contained within the skull (CRANIUM). Arising from the NEURAL TUBE, the embryonic brain is comprised of three major parts including PROSENCEPHALON (the forebrain); MESENCEPHALON (the midbrain); and RHOMBENCEPHALON (the hindbrain). The developed brain consists of CEREBRUM; CEREBELLUM; and other structures in the BRAIN STEM.

Attributes by original data submitter

Sample

source_name
Pre-myelinating oligodendrocytes (pOLs)
strain
C57BL/6
cell type
pOLs from postnatal (P2) brain (p2-pOLs)
passage
0 (single time monolayer cultures)
chip antibody
Anti Ezh2 [Diagenode (http://www.diagenode.com/en/index.php); Cat. no.: CS-039-100; Lot no.: 001]

Sequenced DNA Library

library_name
GSM786031: Ezh2-ChIP-Seq-pOLs
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
11533664
Reads aligned (%)
26.7
Duplicates removed (%)
20.3
Number of peaks
5755 (qval < 1E-05)

mm9

Number of total reads
11533664
Reads aligned (%)
26.7
Duplicates removed (%)
20.7
Number of peaks
5619 (qval < 1E-05)

Base call quality data from DBCLS SRA